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    50 years ago, chemical pollutants were linked to odd animal behavior

    Sea life’s chemical senses Science News, September 18, 1971

    For fish and other underwater life, a sensitivity to chemicals plays the same role as the sense of smell does for land animals.… [Researchers] have been studying the subtle ways this delicate fish-communication system can be disrupted by pollutants…. One study examined the effects of kerosene pollution on the behavior of lobsters…. The experiments demonstrate that chemical communication interference takes place at extremely low dilutions.

    Update

    Chemical pollution — from sewage and agricultural runoff to pharmaceutical waste — muddles aquatic animals’ senses with potentially dire effects, decades of research has shown. A chemical used to treat sewage seems to limit some fish species’ abilities to form schools, making the fish vulnerable to predators (SN: 10/27/07, p. 262). Drug-tainted waters can have a variety of effects on fish, including suppressing their appetites (SN: 12/20/08, p. 15). A plastic chemical also appears to confuse senses: Its scent can lure sea turtles into eating plastic debris (SN: 3/28/20, p. 14). More

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    After 20 years of trying, scientists succeed in doping a 1D chain of cuprates

    When scientists study unconventional superconductors — complex materials that conduct electricity with zero loss at relatively high temperatures — they often rely on simplified models to get an understanding of what’s going on.
    Researchers know these quantum materials get their abilities from electrons that join forces to form a sort of electron soup. But modeling this process in all its complexity would take far more time and computing power than anyone can imagine having today. So for understanding one key class of unconventional superconductors — copper oxides, or cuprates — researchers created, for simplicity, a theoretical model in which the material exists in just one dimension, as a string of atoms. They made these one-dimensional cuprates in the lab and found that their behavior agreed with the theory pretty well.
    Unfortunately, these 1D atomic chains lacked one thing: They could not be doped, a process where some atoms are replaced by others to change the number of electrons that are free to move around. Doping is one of several factors scientists can adjust to tweak the behavior of materials like these, and it’s a critical part of getting them to superconduct.
    Now a study led by scientists at the Department of Energy’s SLAC National Accelerator Laboratory and Stanford and Clemson universities has synthesized the first 1D cuprate material that can be doped. Their analysis of the doped material suggests that the most prominent proposed model of how cuprates achieve superconductivity is missing a key ingredient: an unexpectedly strong attraction between neighboring electrons in the material’s atomic structure, or lattice. That attraction, they said, may be the result of interactions with natural lattice vibrations.
    The team reported their findings today in Science.
    “The inability to controllably dope one-dimensional cuprate systems has been a significant barrier to understanding these materials for more than two decades,” said Zhi-Xun Shen, a Stanford professor and investigator with the Stanford Institute for Materials and Energy Sciences (SIMES) at SLAC. More

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    Breakthrough achievement in quantum computing

    A University of Texas at San Antonio (UTSA) researcher is part of a collaboration that has set a world record for innovation in quantum computing. The accomplishment comes from R. Tyler Sutherland, an assistant professor in the College of Sciences Department of Physics and Astronomy and the College of Engineering and Integrated Design’s Department of Electrical Engineering, who developed the theory behind the record setting experiment.
    Sutherland and his team set the world record for the most accurate entangling gate ever demonstrated without lasers.
    According to Sutherland, an entangling gate takes two qubits (quantum bits) and creates an operation on the secondary qubit that is conditioned on the state of the first qubit.
    “For example, if the state of qubit A is 0, an entangling gate doesn’t do anything to qubit B, but if the state of qubit A is 1, then the gate flips the state of qubit B from 0 to 1 or 1 to 0,” he said. “The name comes from the fact that this can generate a quantum mechanical property called ‘entanglement’ between the qubits.”
    Sutherland adds that making the entangling gates in your quantum computer “laser-free” enables more cost-effective and easier to use quantum computers. He says the price of an integrated circuit that performs a laser-free gate is negligible compared to the tens of thousands of dollars it costs for a laser that does the same thing.
    “Laser-free gate methods do not have the drawbacks of photon scattering, energy, cost and calibration that are typically associated with using lasers,” said Sutherland. “This alternative gate method matches the accuracy of lasers by instead using microwaves, which are less expensive and easier to calibrate.”
    This quantum computing accomplishment is detailed in a paper Sutherland co-authored titled, “High-fidelity laser-free universal control of trapped-ion qubits.” It was published in the scientific journal, Nature, on September 8.
    Quantum computers have the potential to solve certain complex problems exponentially faster than classical supercomputers. One of the most promising uses for quantum computers is to simulate quantum mechanical processes themselves, chemical reactions for example, which could exponentially reduce the experimental trial and error required to solve difficult problems. These computers are being explored in many industries including science, engineering, finance and logistics.
    “Broadly speaking, the goal of my research is to increase human control over quantum mechanics.” said Sutherland. “Giving people power over a different part of nature hands them a new toolkit. What they will eventually build with it is uncertain.”
    That uncertainty, says Sutherland, is what excites him most.
    Sutherland’s research background includes quantum optics, which studies how quantum mechanical systems emit light. He earned his Ph.D. at Purdue University and went on to Lawrence Livermore National Laboratory for his postdoc, where he began working on experimental applications for quantum computers.
    He became a tenure-track assistant professor at UTSA last August as part of the university’s Quantum Computation and Quantum Information Cluster Hiring Initiative.
    Story Source:
    Materials provided by University of Texas at San Antonio. Original written by Bruce Forey. Note: Content may be edited for style and length. More

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    Researchers enlist robot swarms to mine lunar resources

    With scientists beginning to more seriously consider constructing bases on celestial bodies such as the moon, the idea of space mining is growing in popularity.
    After all, if someone from Los Angeles was moving to New York to build a house, it would be a lot easier to buy the building materials in New York rather than buy them in Los Angeles and lug them 2,800 miles. Considering the distance between Earth and the moon is about 85 times greater, and that getting there requires defying gravity, using the moon’s existing resources is an appealing idea.
    A University of Arizona team, led by researchers in the College of Engineering, has received $500,000 in NASA funding for a new project to advance space-mining methods that use swarms of autonomous robots. As a Hispanic-Serving Institution, the university was eligible to receive funding through NASA’s Minority University Research and Education Project Space Technology Artemis Research Initiative.
    “It’s really exciting to be at the forefront of a new field,” said Moe Momayez, interim head of the Department of Mining and Geological Engineering and the David & Edith Lowell Chair in Mining and Geological Engineering. “I remember watching TV shows as a kid, like ‘Space: 1999,’ which is all about bases on the moon. Here we are in 2021, and we’re talking about colonizing the moon.”
    Blast Off!
    According to the Giant Impact Hypothesis, Earth and the moon came from a common parent body, so scientists expect their chemical compositions to be relatively similar. Mining on the moon’s surface could turn up rare earth metals needed for technologies such as smartphones and medical equipment, titanium for use in titanium alloys, precious metals such as gold and platinum, and helium-3 — a stable helium isotope that could fuel nuclear power plants but is extremely rare on Earth. More

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    New ways to improve the science of ‘trade-offs’

    QUT researchers working on complicated problems in agriculture, ecology and medicine have developed a mathematical model to enable faster solutions.
    Questions about intervention, how strong and how long, are just some of the judgment calls faced by doctors and scientists during everyday decision-making.
    From crop production to chemotherapy, new research published in Journal of the Royal Society Interface, improves how to determine the ‘best’ intervention strategies.
    Professor Matthew Simpson, PhD researcher Jesse Sharp and Professor Kevin Burrage from QUT’s Centre for Data Science and Australian Centre of Excellence for Mathematical and Statistical Frontiers (ACEMS) have developed the new mathematical method to faster simulate different scenarios to reach optimal solutions.
    Mr Sharp, who is studying his PhD, said the method involved optimal control theory which could be described as a “science of trade-offs” between competing objectives.
    “Using mathematical optimisation techniques help us to make smarter, more efficient resource allocation decisions,” he said. More

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    GaN-on-diamond semiconductor material that can take the heat – 1,000 degrees to be exact

    The need for more powerful electronic devices in today’s society is curtailed by our ability to produce highly conductive semiconductors that can withstand the harsh, high temperature fabrication processes of high-powered devices.
    Gallium nitride (GaN)-on-diamond shows promise as a next-generation semiconductor material due to the wide band gap of both materials, allowing for high conductivity, and diamond’s high thermal conductivity, positioning it as a superior heat-spreading substrate. There have been attempts at creating a GaN-on-diamond structure by combining the two components with some form of transition or adhesion layer, but in both cases the additional layer significantly interfered with diamond’s thermal conductivity — defeating a key advantage of the GaN-diamond combination.
    “There is thus a need for a technology that can directly integrate diamond and GaN,” states Jianbo Liang, Associate Professor of the Graduate School of Engineering, Osaka City University (OCU), and first author of the study, “However, due to large differences in their crystal structures and lattice constants, direct diamond growth on GaN and vice versa is impossible.”
    Fusing the two elements together without any intermediate layers, known as Wafer direct bonding, is one way of getting around this mismatch. However, to create a sufficiently high bonding strength many direct bonding methods, the structure needs to be heated to extremely high degrees (typically 500 degrees Celsius) in something called a post-annealing process. This generally causes cracks in a bonded sample of dissimilar materials due to a thermal expansion mismatch — this time defeating any chance of the GaN-diamond structure surviving the extremely high temperatures that high-power devices go through during fabrication.
    “In previous work, we used surface activated bonding (SAB) to successfully fabricate various interfaces with diamond at room temperature, all exhibiting a high thermal stability and an excellent practicality,” says research lead Professor Naoteru Shigekawa.
    As reported this week in the journal ADVANCED MATERIALS, Liang, Shigekawa and their colleagues from Tohoku University, Saga University, and Adamant Namiki Precision Jewel. Co., Ltd, use the SAB method to successfully bond GaN and diamond, and demonstrate that the bonding is stable even when heated to 1,000 degrees Celsius.
    SAB creates highly strong bonds between different materials at room temperature by atomically cleaning and activating the bonding surfaces to react when brought into contact with each other.
    As the chemical properties of GaN is completely different from materials the research team has used in the past, after they used SAB to create the GaN-on-diamond material, they used a variety of techniques to test the stability the bonding site — or heterointerface. To characterize the residual stress in the GaN of the heterointerface they used micro-Raman spectroscopy, transmission electron microscopy (TEM) and energy-dispersive X-ray spectroscopy shed light on the nanostructure and the atomic behavior of the heterointerface, electron energy-loss spectroscopy (EELS) showed the chemical bonding states of the carbon atoms at the heterointerface, and the thermal stability of the heterointerface was tested at 700 degrees Celsius in N2 gas ambient pressure, “which is required for GaN-based power device fabrication processes,” states Liang.
    Results showed that at the heterointerface an intermediate layer of approximately 5.3 nm formed that was a mixture of amorphous carbon and diamond in which Ga and N atoms were distributed. As the team increased annealing temperatures, they noticed a decrease in the layer thickness, “due to a direct conversion of amorphous carbon into diamond,” as Shigekawa puts it. After annealing at 1,000 degrees Celsius, the layer decreased to 1.5nm, “suggesting the intermediate layer can be completely removed by optimizing the annealing process,” continues the professor. Although numbers for compressive strength of the heterointerface improved as annealing temperatures increased, they did not match those of GaN-on-diamond structures formed by crystal growth.
    However, “as no peeling was observed at the heterointerface after annealing at 1000 degrees Celsius,” states Liang, “these results indicate that the GaN/diamond heterointerface can withstand harsh fabrications processes, with temperature rise in gallium nitride transistors being suppressed by a factor of four.” More

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    Clouds affected by wildfire smoke may produce less rain

    When smoke rises from wildfires in the western United States, it pummels clouds with tiny airborne particles. What happens next with these clouds has been largely unstudied. But during the 2018 wildfire season, researchers embarked on a series of seven research flights, including over the Pacific Northwest, to help fill this gap.

    Using airborne instruments to analyze small cumulus clouds affected by the smoke, the scientists found that these clouds contained, on average, five times as many water droplets as unaffected clouds. That in itself was not a huge surprise; it’s known that organic and inorganic particles in smoke can serve as tiny nuclei for forming droplets (SN: 12/15/20). But the sheer abundance of droplets in the affected clouds astounded the team. 

    Counterintuitively, those numerous droplets didn’t make the clouds more likely to produce rain. In fact, the opposite occurred. Because the droplets were about half as big as those found in a typical cloud, they were unlikely to collide and merge with enough other droplets to result in rain. The chances of rain were “virtually zero,” the researchers write in the August Geophysical Research Letters.

    The new research suggests that wildfires could lead to clouds producing less rain in the U.S. West, feeding into drought conditions and potentially increasing future wildfire risk.

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    But the environmental dynamics involved are complex, says Cynthia Twohy. She’s a San Diego–based atmospheric scientist at NorthWest Research Associates, a research organization specializing in geophysical and space sciences headquartered in Redmond, Wash. For instance, Twohy and her colleagues found that “the ratio of light-absorbing to light-scattering particles in the smoke was somewhat lower than measured in many prior studies,” she says.  

    “The take-home message is that while other studies have shown wildfire smoke has an absorbing (warming) influence that can be important for cloud formation and development, these impacts may be less in the western U.S., because the smoke is not as dark,” Twohy says. The impact of the lighter smoke is still an open question. “It’s just another way that smoke-cloud interactions are a wild card in the region.”  

    The team used onboard probes to sample clouds affected by wildfire smoke and compare them to their more pristine counterparts. The probes measured how many cloud droplets were present in the samples, the size range of those droplets and the liquid water content of the clouds.

    A special tube mounted on the exterior of the plane to collect and evaporate cloud droplets was used to “reveal the particles that the droplets were condensed on,” says Robert Yokelson, an atmospheric chemist at the University of Montana in Missoula who was not involved with the research. This process enabled the researchers to confirm what the original smoke particles were made of, a technique that Yokelson calls “neat.”

    The analysis detected the amounts of carbon, oxygen, nitrogen, sulfur and potassium found in residual particles evaporated from cloud droplets. These elements were present in similar amounts to those found in smoke particles sampled from below the clouds, “implying that the cloud droplets also formed on smoke particles,” Twohy says.

    Previous studies conducted in the Amazon have shown that “smoke will make the cloud droplets smaller and more numerous,” thereby reducing rainfall, Yokelson says. But this study provides robust evidence that the phenomenon isn’t isolated to the Amazon. It echoes the results of a much smaller 1974 study of smoke-filled clouds over the western United States, providing a crucial present-day snapshot of the challenges facing the region.

    Wildfires in the western United States have been breaking records in recent years — increasing in number and size due to climate change — a trend that scientists think will get worse as the globe continues to warm (SN: 12/21/20). As a result, Twohy says, it’s increasingly important that researchers continue to monitor these fires’ influence on the atmosphere. More

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    New machine-learning approach is better at spotting enzymatic metals in proteins

    Last season, Kansas City Chiefs quarterback Patrick Mahomes boasted a 66.3 pass-completion percentage.
    But Mahomes’ impressive stat pales compared with the accuracy of MAHOMES, or Metal Activity Heuristic of Metalloprotein and Enzymatic Sites, a machine-learning model developed at the University of Kansas — and named in the quarterback’s honor — that could lead to more effective, eco-friendly and cheaper drug therapies and other industrial products.
    Instead of targeting wide receivers, MAHOMES differentiates between enzymatic and non-enzymatic metals in proteins with a precision rate of 92.2%. A team at KU recently published results on this machine-learning approach to differentiating enzymes in Nature Communications.
    “Enzymes are super interesting proteins that do all the chemistry — an enzyme does a chemical reaction on something to transform it from one thing to another thing,” said corresponding author Joanna Slusky, associate professor of molecular biosciences and computational biology at KU. “Everything that you bring into your body, your body breaks it down and makes it into new things, and that process of breaking down and making into new things — all of that is due to enzymes.”
    Slusky and graduate student collaborators in her lab, Ryan Feehan (the Chiefs fan who named MAHOMES) and Meghan Franklin of KU’s Center for Computational Biology, sought to use computers to distinguished between metalloproteins, which don’t perform chemical reactions, and metalloenzymes, which facilitate chemical reactions with amazing power and efficiency.
    The problem is metalloproteins and metalloenzymes are in many ways identical. More