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    Social media data could help predict the next COVID surge

    In the summer of 2021, as the third wave of the COVID-19 pandemic wore on in the United States, infectious disease forecasters began to call attention to a disturbing trend.
    The previous January, as models warned that U.S. infections would continue to rise, cases plummeted instead. In July, as forecasts predicted infections would flatten, the Delta variant soared, leaving public health agencies scrambling to reinstate mask mandates and social distancing measures.
    “Existing forecast models generally did not predict the big surges and peaks,” said geospatial data scientist Morteza Karimzadeh, an assistant professor of geography at CU Boulder. “They failed when we needed them most.”
    New research from Karimzadeh and his colleagues suggests a new approach, using artificial intelligence and vast, anonymized datasets from Facebook could not only yield more accurate COVID-19 forecasts, but also revolutionize the way we track other infectious diseases, including the flu.
    Their findings, published in the International Journal of Data Science and Analytics, conclude this short-term forecasting method significantly outperforms conventional models for projecting COVID trends at the county level.
    Karimzadeh’s team is now one of about a dozen, including those from Columbia University and the Massachusetts Institute of Technology (MIT), submitting weekly projections to the COVID-19 Forecast Hub, a repository that aggregates the best data possible to create an “ensemble forecast” for the Centers for Disease Control. Their forecasts generally rank in the top two for accuracy each week. More

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    Tiny, cheap solution for quantum-secure encryption

    It’s fairly reasonable to assume that an encrypted email can’t be seen by prying eyes. That’s because in order to break through most of the encryption systems we use on a day-to-day basis, unless you are the intended recipient, you’d need the answer to a mathematical problem that’s nearly impossible for a computer to solve in a reasonable amount of time.
    Nearly impossible for modern-day computers, at least.
    “If quantum computing becomes a reality, however, some of those problems are not hard anymore,” said Shantanu Chakrabartty, the Clifford W. Murphy Professor and vice dean for research and graduate education in the Preston M. Green Department of Electrical & Systems Engineering at the McKelvey School of Engineering.
    Already these new computing paradigms are becoming a reality and could soon be deployable. Hackers are already preparing by storing encrypted transactions now with the expectation they can decipher the information later.
    Chakrabartty’s lab at Washington University in St. Louis proposes a security system that is not only resistant to quantum attacks, but is also inexpensive, more convenient, and scalable without the need for fancy new equipment.
    This research will appear in the IEEE Transactions of Information Forensics Science.
    Security is often managed today by key distribution systems in which one person sends information hidden behind a key, maybe a long string of seemingly unassociated numbers. The receiver of that information can access the information if they possess another specific key. The two keys are related in a mathematical way that is nearly impossible to guess, but can be easily solved with the right algorithm or using a quantum computer. More

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    Tackling large data sets and many parameter problems in particle physics

    One of the major challenges in particle physics is how to interpret large data sets that consist of many different observables in the context of models with different parameters.
    A new paper published in EPJ Plus, authored by Ursula Laa from the Institute of Statistics at BOKU University, Vienna, and German Valencia from the School of Physics and Astronomy, Monash University, Clayton, Australia, looks at the simplification of large data set and many parameter problems using tools to split large parameter spaces into a small number of regions.
    “We applied our tools to the so-called B-anomaly problem. In this problem there is a large number of experimental results and a theory that predicts them in terms of several parameters,” Laa says. “The problem has received much attention because the preferred parameters to explain the observations do not correspond to those predicted by the standard model of particle physics, and as such the results would imply new physics.”
    Valencia continues by explaining the paper shows how the Pandemonium tool can provide an interactive graphical way to study the connections between characteristics in the observations and regions of parameter space.
    “In the B-anomaly problem, for example, we can clearly visualise the tension between two important observables that have been singled out in the past,” Valencia says. “We can also see which improved measurements would be best to address that tension.
    “This can be most helpful in prioritising future experiments to address unresolved questions.”
    Laa elaborates by explaining that the methods developed and used by the duo are applicable to many other problems, in particular for models and observables that are less well understood than the applications discussed in the paper, such as multi Higgs models.
    “A challenge is the visualization of multidimensional parameter spaces, the current interface only allows the user to visualise high dimensional data spaces interactively,” Laa concludes. “The challenge is to automate this, which will be addressed in future work, using techniques from dimension reduction.”
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    The opto-ionic effect: Light may increase performance of fuel cells and lithium-ion batteries

    Lithium-ion batteries, fuel cells and many other devices depend on the high mobility of ions in order to work properly. But there a large number of obstacles to such mobility. A research team led by Jennifer L. M. Rupp of the Technical University of Munich (TUM) and Harry L. Tuller of the Massachusetts Institute of Technology (MIT) have now shown for the first time that light can be used to increase the mobility of ions and improve the performance of such devices.
    A charge can be transported by a material in a number of different ways. The most familiar is the electrical conductivity of metals, where the charge is borne by electrons. In many devices, however, ions transport the charge. One example is lithium-ion batteries in which lithium ions move during charging and discharging. Similarly, fuel cells rely on the transport of hydrogen and oxygen ions in order to conduct electricity.
    Ceramics are currently being investigated as solid electrolytes for transporting oxygen ions. But: “What we find is that the ionic conductivity — the rate at which the ions can move and, therefore, how efficient the resulting device can be — is often markedly degraded by the fact that the ions get blocked at grain boundaries,” says Prof. Harry L. Tuller of the Massachusetts Institute of Technology.
    Light puts ions on the go
    In their current publication Tuller and his colleague Jennifer L. M. Rupp, Professor for solid-state electrolyte chemistry at the Technical University of Munich, show how light can be used to reduce the barriers encountered by ions at ceramic grain boundaries.
    Many devices based on ion conductivity, such as solid-oxide fuel cells, have to operate at very high temperatures in order for the ions to be able to overcome the grain boundary barriers. Operating temperatures of up to 700° Celsius, however, present their own challenges: Materials age faster and the infrastructure for maintaining these high temperatures is costly. More

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    Active video games provide alternative workout

    Working out isn’t known for being fun. But new active video and virtual reality games may help change that.
    Exergaming, or active video gaming, may be the perfect introduction to helping people be more active, according to new research from the University of Georgia.
    Just about anyone can find an exergame to match their interests. Dance Dance Revolution, EA Sports Active and Beat Saber are some of the more popular exergames. Active gaming options exist for most gaming consoles, like Xbox and Nintendo. And previous research has shown that exergaming can have physical benefits, particularly when it takes the place of traditional sedentary video gaming.
    This study showed that exergamers felt high levels of satisfaction and a sense of autonomy over their exercise regimen.
    “When an individual feels autonomous, they’re more likely to exercise or exergame on their own,” said Sami Yli-Piipari, co-author of the study and an associate professor in the Department of Kinesiology in the Mary Frances Early College of Education. “They feel ownership over what they are doing, and they’re doing it for themselves, so it’s more likely they will keep up the activity.”
    Traditional exercise, such as weightlifting or running, doesn’t appeal to some people. But they might be open to active video gaming because it doesn’t seem like exercise. It’s just fun. More

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    'Off label' use of imaging databases could lead to bias in AI algorithms

    Significant advances in artificial intelligence (AI) over the past decade have relied upon extensive training of algorithms using massive, open-source databases. But when such datasets are used “off label” and applied in unintended ways, the results are subject to machine learning bias that compromises the integrity of the AI algorithm, according to a new study by researchers at the University of California, Berkeley, and the University of Texas at Austin.
    The findings, published this week in the Proceedings of the National Academy of Sciences, highlight the problems that arise when data published for one task are used to train algorithms for a different one.
    The researchers noticed this issue when they failed to replicate the promising results of a medical imaging study. “After several months of work, we realized that the image data used in the paper had been preprocessed,” said study principal investigator Michael Lustig, UC Berkeley professor of electrical engineering and computer sciences. “We wanted to raise awareness of the problem so researchers can be more careful and publish results that are more realistic.”
    The proliferation of free online databases over the years has helped support the development of AI algorithms in medical imaging. For magnetic resonance imaging (MRI), in particular, improvements in algorithms can translate into faster scanning. Obtaining an MR image involves first acquiring raw measurements that code a representation of the image. Image reconstruction algorithms then decode the measurements to produce the images that clinicians use for diagnostics.
    Some datasets, such as the well-known ImageNet, include millions of images. Datasets that include medical images can be used to train AI algorithms used to decode the measurements obtained in a scan. Study lead author Efrat Shimron, a postdoctoral researcher in Lustig’s lab, said new and inexperienced AI researchers may be unaware that the files in these medical databases are often preprocessed, not raw.
    As many digital photographers know, raw image files contain more data than their compressed counterparts, so training AI algorithms on databases of raw MRI measurements is important. But such databases are scarce, so software developers sometimes download databases with processed MR images, synthesize seemingly raw measurements from them, and then use those to develop their image reconstruction algorithms. More

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    Leveraging AI to work with cells

    One of the ultimate goals of medical science is to develop personalized disease diagnostics and therapeutics. With a patient’s genetic information, doctors could tailor treatments to individuals, leading to safer and more effective care.
    Recent work from a team of Northwestern Engineering researchers has moved the field closer to realizing this future.
    Led by Professor Horacio Espinosa, the research team developed a new version of its Nanofountain Probe Electroporation (NFP-E), a tool used to deliver molecules into single-cells using electricity. The enhanced method leverages artificial intelligence (AI) to execute cell engineering tasks such as cell nuclei localization and probe detection. Other processes such as probe motion, probe-to-cell contact detection, and electroporation-mediated delivery of foreign cargo into single cells are also automated, minimizing user intervention.
    “NFP-E can handle small starting samples without any significant cell loss in the entire protocol,” said Espinosa, James N. and Nancy J. Farley Professor in Manufacturing and Entrepreneurship at the McCormick School of Engineering and the study’s corresponding author. “This is an advantage over other cell engineering methods such as bulk electroporation, which require millions of cells and lead to significant cell losses. The automated NFP-E, combined with its ability to selectively target and manipulate single cells in micro-arrays, can be useful in fundamental research, such as deciphering intracellular dynamics and cell-to-cell communication studies as well as biological applications such as cell line generation.”
    Espinosa and graduate students Prithvijit Mukherjee, Cesar A. Patino, and Nibir Pathak reported their work in the paper “Deep Learning Assisted Automated Single Cell Electroporation Platform for Effective Genetic Manipulation of Hard-to-Transfect Cells” published March 21 in Small.
    “Genetic manipulation of human induced pluripotent stem cells (hiPSCs) by introducing exogenous cargo has a wide range of applications in disease diagnostics, therapeutic discovery, and regenerative medicine,” said Mukherjee, a PhD student in the Espinosa group who is joining the microfluidics group at Illumina. More

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    Fast-moving excitons observed in metal, unlocking potential to speed up digital communication

    In a world first, a team co-led by a physicist at City University of Hong Kong (CityU) has discovered that excitons — excited electrons bound to empty electron “holes” — can exist stably and travel rapidly through metal. Because excitons can be generated by energy from light and have no electrical charge, this discovery makes them potential candidates as a higher-speed alternative to free electrons as a carrier of digital information.
    Excitons form when certain materials absorb energy from light to excite electrons, the negatively charged particles in atoms. The electrons are boosted to a higher energy level to leave positively charged spaces or “holes” in their original position. Owing to electrostatic attraction, a hole and an excited electron can pair up without recombining, forming an exciton that behaves like an uncharged particle.
    “When an exciton’s electron recombines with a hole, energy is emitted as light, which could be harnessed for data transfer in the optoelectronics industry,” says team co-leader Dr Ma Junzhang, Assistant Professor in the CityU Department of Physics. “Excitons would be better data carriers than free electrons, whose negative charge slows them down, but excitons are very unstable, especially in metals. In fact, before our study, stable and mobile excitons were thought to be impossible in metals.”
    The researchers succeeded in generating and detecting excitons in metal because of a combination of optimal test conditions and unique characteristics of their chosen material, tantalum triselenide, TaSe3. The research was headed by CityU and the Paul Scherrer Institute (PSI) in Switzerland, and the results were published in Nature Materials in an article titled “Multiple mobile excitons manifested as sidebands in quasi-one-dimensional metallic TaSe3.” The joint corresponding authors of the paper were Dr Ma Junzhang, and Professor Shi Ming and Dr Markus Müller from PSI. Collaborators included researchers from Rutgers University, Princeton University, Stanford University, and other institutions.
    Importance of excitons as robust information carriers
    The exciton is expected to play an important role in the future of information transmission thanks to both its charge neutrality and ability to move through a solid. Unlike negatively charged free electrons, excitons are unhindered by external electric fields, magnetic fields, and defects in the surrounding material. More